Nigel Michki's Most Excellent Script for using NMWiz
NMWiz is an awesome add in for VMD for quickly visualizing and animating modes. However the expected input files are from the Bahar group's ProDy program. Nigel Michki put together an excellent python script that converts charmm normal mode analysis output to the required format for NMWiz. We love it! Note because it is all atom, the animation is too slow, but the vector visualization is very useful. We hope to make a new script to reduce the vectors to just C-alphas. You will need to remove the .txt ending. This was appended by drupal.
Resource_file:
Attachment | Size |
---|---|
nmwizConverter.py.txt | 3.74 KB |
mode.py.txt | 582 bytes |
atom.py.txt | 698 bytes |